Sequencing Data Interest Group (SDIG)

The Cancer Center is organizing a biweekly Sequencing Data Interest Group (SDIG) meeting. The goal is to bring all colleagues' effort and expertise together, so we can learn and benefit from each other to DIG out more from the huge data sets since this area is new and moving very fast. Anyone who has an interest in generating sequencing data and data analysis is welcome to attend.

Meetings are held 2:30 pm - 3:30 pm in Wolstein Research Building. Please contact Shuying Sun, PhD if you have any questions.

SDIG Meetings 2010

Date/ Location	Speaker	Title
Monday, February 1, 2010	John Archer, PhD, MSc	Quantitative Deep Sequencing and Detecting HIV-1 Drug Resistance
Monday, February 15, 2010	Xiaodong Bai, PhD	Identifying HEXIM1-Interaction Factor Binding Sites Using ChIP-Seq Data Analysis
Monday, March 1, 2010	Pieter Faber, PhD	CCF Genomics Core: Deep Sequencing Services (Library preparation, Sequencing Data Generation, Creating output files that can be analyzed on a PC)
Monday, March 15, 2010	Neil Molyneaux	SLATE: A Unix Tool to Facilitate Sequence Sorting and Mapping of Variants to Genome Annotation
Monday, March 29, 2010	David Serre, PhD	Analyzing RNA-seq Data
Monday, April 12, 2010	Mark Adams, PhD	De Novo Bacterial Genome Sequencing: A Velvet Touch is Just the Beginning
Monday, April 26, 2010	Peter Scacheri, PhD	Post-Processing of ChIP-seq Data: How to Find Biological Meaning Within the Mountain of Data
Monday, May 10, 2010	Yaomin Xu, PhD	Differential Analysis to Identify Genome-wide DNA Methylation Markers Using ChIP-seq Data
Monday, September 27, 2010	Xiaoqing Yu, PhD student	A SNP discovery method to assess variant allele probability from next-generation resequencing data
Monday, October 11, 2010	Ernest Chan, Postdoctoral Fellow	Determining microflora composition using 16S rRNA deep sequencing data
Monday, October 25, 2010	Mark Adams, PhD	Exome sequencing identifies MLL2 mutations as a cause of Kabuki syndrome
Monday, November 8, 2010	Shuying Sun, PhD	Exploratory Analysis of Bisulfite-Converted Methylation Sequencing Data
Monday, November 22, 2010	Gokhan Yavas, PhD	Algorithms to detect tandem duplications in cancer genome using paired-end NGS data
Monday, December 6, 2010		canceled